STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26627.1Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (216 aa)    
Predicted Functional Partners:
EKY26470.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: cbk:CLL_A1583 1.2e-107 transketolase K00615; Psort location: Cytoplasmic, score: 7.50.
  
 0.978
EKY27767.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: cpr:CPR_0287 5.5e-121 transketolase K00615; Psort location: Cytoplasmic, score: 7.50.
  
 0.972
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
    0.927
EKY27654.1
Ribose-5-phosphate isomerase B; KEGG: cbe:Cbei_0407 2.2e-60 RpiB/LacA/LacB family sugar-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.916
EKY26358.1
KEGG: cbe:Cbei_0761 2.1e-64 ribose 5-phosphate isomerase K01807; Psort location: Cytoplasmic, score: 7.50.
  
 0.910
EKY27766.1
Transketolase, pyridine binding domain protein; KEGG: cpf:CPF_0293 1.1e-129 putative transketolase, C-terminal subunit; K00615 transketolase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.908
EKY26471.1
Transketolase, pyridine binding domain protein; KEGG: cbt:CLH_1497 4.3e-137 transketolase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.907
EKY27750.1
Kinase, PfkB family; KEGG: cpe:CPE0146 7.2e-158 2-keto-3-deoxygluconate kinase; K00874 2-dehydro-3-deoxygluconokinase; Psort location: Cytoplasmic, score: 7.50.
  
 0.899
EKY28123.1
Kinase, PfkB family; KEGG: cdf:CD1806 1.7e-92 scrK; putative fructokinase; K00847 fructokinase.
  
 0.888
EKY29465.1
Pyruvate synthase; KEGG: cbt:CLH_0756 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
    
 0.870
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.