STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26661.1RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (235 aa)    
Predicted Functional Partners:
EKY26662.1
sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
 
  
 0.899
EKY27009.1
Sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
   
 0.839
EKY26645.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
    0.802
EKY27243.1
Stage V sporulation protein T; Psort location: Cytoplasmic, score: 9.97.
  
    0.800
EKY27672.1
Sporulation transcriptional regulator SpoIIID; Psort location: Cytoplasmic, score: 7.50.
  
    0.799
EKY27642.1
Stage II sporulation protein R; Psort location: Cytoplasmic, score: 7.50.
 
     0.797
EKY27008.1
SpoIVB peptidase; KEGG: cbk:CLL_A2396 2.2e-124 spoIVB; stage IV sporulation protein B K06399.
  
     0.774
EKY22768.1
Stage V sporulation protein AE; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.774
EKY22769.1
KEGG: bao:BAMF_1841 2.1e-71 spoVAD1; stage V sporulation protein AD.
  
     0.773
EKY22770.1
Stage V sporulation protein AC; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.773
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.