Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26664.1Twitching mobility protein. (351 aa)    
Predicted Functional Partners:
EKY28792.1
General secretory system II, protein E protein; KEGG: apb:SAR116_2518 4.4e-09 type II secretion system PilB K02652; Psort location: Cytoplasmic, score: 9.97.
  
 0.945
EKY28793.1
KEGG: cbe:Cbei_4219 1.5e-77 peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.857
EKY28790.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.8e-42 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.824
EKY26978.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.1e-15 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.824
EKY22360.1
Type IV pilus assembly protein PilM; KEGG: edi:EDI_273920 5.1e-06 E3 ubiquitin protein ligase BRE1A.
 
   
 0.820
EKY26665.1
RNA polymerase sigma-K factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.659
EKY27374.1
Diguanylate cyclase domain protein.
 
   
 0.530
EKY27130.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.1e-24 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
     
 0.526
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 0.514
EKY26666.1
Penicillin-binding protein, transpeptidase domain protein.
       0.483
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.