STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26693.1Radical SAM domain protein. (229 aa)    
Predicted Functional Partners:
EKY28344.1
Hypothetical protein.
  
     0.623
EKY28450.1
Hypothetical protein; KEGG: rxy:Rxyl_1893 8.1e-24 signal transduction histidine kinase, LytS; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.609
EKY28342.1
Hypothetical protein.
  
     0.582
EKY28343.1
Hypothetical protein.
  
     0.564
EKY26433.1
Hypothetical protein; KEGG: pfh:PFHG_01225 0.00091 hypothetical protein similar to DNA repair protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.483
EKY26694.1
Glyoxalase family protein.
       0.429
EKY28449.1
KEGG: cpr:CPR_1971 1.3e-112 IunH family nucleoside hydrolase; K01239 purine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
 
     0.414
EKY22884.1
Putative septum site-determining protein MinC.
  
     0.409
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.