Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY26500.1KEGG: apb:SAR116_2098 0.00052 nitrate ABC transporter, permease protein, putative K02050; Psort location: CytoplasmicMembrane, score: 10.00. (250 aa)    
Predicted Functional Partners:
EKY26501.1
Hypothetical protein.
 
 0.993
EKY26499.1
ABC transporter, ATP-binding protein; KEGG: cbt:CLH_2305 4.3e-41 aliphatic sulfonates import ATP-binding protein SsuB K02049; Psort location: CytoplasmicMembrane, score: 8.78.
 0.974
EKY23252.1
NLPA lipoprotein; KEGG: apb:SAR116_1971 0.0044 ABC transporter, periplasmic substrate-binding protein K02051.
 
 0.869
EKY26159.1
NMT1/THI5-like protein.
  
 0.867
EKY25756.1
[2Fe-2S]-binding domain protein.
    
 0.828
EKY26160.1
ABC transporter, ATP-binding protein.
  
 0.804
EKY23251.1
ABC transporter, ATP-binding protein; KEGG: bmd:BMD_4703 1.4e-37 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein SsuB K02049; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.804
EKY27427.1
Nitrogen regulatory protein P-II; KEGG: psl:Psta_0819 1.1e-86 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the P(II) protein family.
    
 
 0.486
EKY26304.1
Molybdopterin oxidoreductase; KEGG: aoe:Clos_0245 7.7e-122 formate dehydrogenase; Psort location: Cytoplasmic, score: 9.67; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.437
EKY28698.1
Cobalt ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1498 4.0e-157 ABC-type cobalt transport system, ATPase component K02006; Psort location: CytoplasmicMembrane, score: 9.96.
    
  0.428
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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