STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26430.1Shikimate kinase; KEGG: cbt:CLH_2888 2.4e-24 aroK; shikimate kinase K00891; Psort location: Cytoplasmic, score: 7.50. (97 aa)    
Predicted Functional Partners:
EKY26424.1
KEGG: cbe:Cbei_4576 3.2e-100 aroB; 3-dehydroquinate synthase K01735; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.998
EKY26428.1
Chorismate mutase; KEGG: cbe:Cbei_4573 1.1e-122 chorismate mutase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.991
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
 
 0.991
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
 
 0.990
EKY26427.1
KEGG: cno:NT01CX_0623 2.0e-43 aroC; chorismate synthase K01736; overlaps another CDS with the same product name.
 
 
 0.957
EKY26426.1
KEGG: cbk:CLL_A3141 2.0e-91 aroC; chorismate synthase K01736; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
 
 
 0.954
EKY26440.1
Shikimate dehydrogenase substrate binding domain protein; KEGG: cbt:CLH_0668 2.0e-68 aroE; shikimate 5-dehydrogenase K00014.
 
 
 0.922
EKY26441.1
KEGG: lin:lin0493 5.7e-39 aroE; shikimate 5-dehydrogenase K00014; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.896
EKY26432.1
KEGG: cbt:CLH_2886 1.0e-103 prephenate dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.803
EKY26431.1
KEGG: cbt:CLH_2887 2.0e-137 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.709
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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