STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26433.1Hypothetical protein; KEGG: pfh:PFHG_01225 0.00091 hypothetical protein similar to DNA repair protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00. (657 aa)    
Predicted Functional Partners:
EKY28343.1
Hypothetical protein.
  
    0.713
EKY28342.1
Hypothetical protein.
  
    0.705
EKY28344.1
Hypothetical protein.
  
    0.704
EKY25650.1
Hypothetical protein.
  
     0.617
EKY23872.1
Hypothetical protein; KEGG: edi:EDI_294890 0.00029 DNA mismatch repair protein MSH2.
  
     0.601
EKY23483.1
KEGG: edi:EDI_025770 0.0061 protein serine/threonine kinase; Psort location: Extracellular, score: 8.91.
  
     0.585
EKY26370.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.581
EKY23220.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.551
EKY23897.1
Bacteriophage Gp15 protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.537
EKY23485.1
Pentapeptide repeat protein; KEGG: btk:BT9727_2180 9.2e-05 acetyltransferase K00680; Psort location: Cytoplasmic, score: 7.50.
 
     0.536
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.