Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY26439.1Hypothetical protein; Psort location: Extracellular, score: 8.91. (61 aa)    
Predicted Functional Partners:
EKY26440.1
Shikimate dehydrogenase substrate binding domain protein; KEGG: cbt:CLH_0668 2.0e-68 aroE; shikimate 5-dehydrogenase K00014.
       0.413
EKY26441.1
KEGG: lin:lin0493 5.7e-39 aroE; shikimate 5-dehydrogenase K00014; Psort location: Cytoplasmic, score: 7.50.
       0.413
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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