STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26455.1Transcriptional regulator, MarR family. (145 aa)    
Predicted Functional Partners:
EKY29652.1
KEGG: bmq:BMQ_3353 6.3e-207 PTS system, beta-glucoside-specific IIABC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.827
EKY28978.1
PTS system, beta-glucoside-specific, IIABC component.
   
 
 0.827
EKY26454.1
MATE domain protein; KEGG: rlt:Rleg2_4805 2.0e-05 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.492
EKY26452.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.490
EKY26453.1
MATE domain protein; KEGG: rlt:Rleg2_4805 1.8e-15 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.477
EKY26370.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.459
EKY29024.1
Hypothetical protein; KEGG: btl:BALH_2691 5.4e-05 sensor histidine kinase K07706; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.418
EKY29337.1
KEGG: cbe:Cbei_4532 5.1e-212 PTS system, N-acetylglucosamine-specific IIBC subunit; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.403
EKY29108.1
PTS system, glucose-like IIB component.
     
 0.403
EKY26874.1
KEGG: cbt:CLH_1686 1.3e-206 treP; PTS system, trehalose-specific IIBC component; K02818 PTS system, trehalose-specific IIB component K02819; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.403
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.