STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26346.1Branched-chain amino acid ABC transporter, permease protein; KEGG: pmo:Pmob_0638 7.7e-17 monosaccharide-transporting ATPase K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (308 aa)    
Predicted Functional Partners:
EKY26347.1
ABC transporter substrate binding protein.
    0.998
EKY26345.1
KEGG: cbt:CLH_1096 4.2e-98 phosphonates import ATP-binding protein PhnC 2 K05833; Psort location: CytoplasmicMembrane, score: 8.78.
 
    0.980
EKY26348.1
HutP; Psort location: CytoplasmicMembrane, score: 8.16.
 
     0.641
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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