STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26249.1Hypothetical protein; KEGG: oih:OB2461 1.1e-65 phytoene dehydrogenase; K10027 phytoene dehydrogenase. (344 aa)    
Predicted Functional Partners:
EKY26250.1
Hypothetical protein; KEGG: sam:MW2482 1.5e-17 crtN; squalene synthase; K10209 dehydrosqualene desaturase.
     0.988
EKY26248.1
KEGG: cac:CA_C1432 1.5e-84 undecaprenyl pyrophosphate synthase related enzyme; K00806 undecaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.67.
    
  0.805
EKY23553.1
Hypothetical protein; KEGG: mcu:HMPREF0573_11599 5.4e-08 pphA; Ser/Thr and Tyr protein phosphatase (dual specificity); Psort location: CytoplasmicMembrane, score: 9.35.
  
 
 0.786
EKY23254.1
KEGG: toc:Toce_1348 5.4e-82 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UbiA prenyltransferase family.
  
 
 0.462
EKY27002.1
Putative geranyltranstransferase; KEGG: cbe:Cbei_1705 8.8e-98 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.402
EKY23259.1
Polyprenyl synthetase; KEGG: lmc:Lm4b_02608 1.2e-84 heptaprenyl diphosphate synthase component II; K00805 heptaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
 
 0.402
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.