Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY26255.1SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 2.5e-45 membrane protease subunits, stomatin/prohibitin homologs. (314 aa)    
Predicted Functional Partners:
EKY26256.1
Nodulation efficiency protein D; KEGG: rru:Rru_A1555 0.0093 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.976
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.875
ftsH-2
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.875
EKY29452.1
KEGG: cbf:CLI_0473 1.4e-51 S54 family peptidase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.836
EKY25982.1
KEGG: cbb:CLD_1355 1.0e-110 M16 family peptidase; Psort location: Cytoplasmic, score: 7.50.
  
 0.639
EKY22509.1
Peptidase, M16 family; KEGG: ctc:CTC01755 6.5e-86 zinc protease K01422; Psort location: Cytoplasmic, score: 7.50.
  
 0.639
EKY22118.1
KEGG: cbb:CLD_2229 4.9e-120 M16 family peptidase; Psort location: Cytoplasmic, score: 7.50.
  
 0.639
EKY27300.1
Membrane protein insertase, YidC/Oxa1 family; KEGG: apb:SAR116_1502 5.9e-10 60 kDa inner membrane insertion protein K03217; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.621
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.610
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 
 0.592
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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