STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26256.1Nodulation efficiency protein D; KEGG: rru:Rru_A1555 0.0093 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 K00330; Psort location: CytoplasmicMembrane, score: 10.00. (142 aa)    
Predicted Functional Partners:
cobS
Cobalamin-5-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.975
EKY26255.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 2.5e-45 membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.961
EKY28459.1
SPFH/Band 7/PHB domain protein; KEGG: gga:427310 7.6e-07 RNF20; ring finger protein 20; K10696 E3 ubiquitin-protein ligase BRE1; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.765
EKY25128.1
Hypothetical protein; KEGG: bao:BAMF_0407 5.5e-09 rapH1; response regulator aspartate phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
    0.589
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.563
EKY25127.1
KEGG: apb:SAR116_1706 0.00017 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.558
EKY26254.1
Hypothetical protein.
       0.497
EKY28132.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.484
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
    0.470
EKY27871.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.437
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.