Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY26265.1Restriction endonuclease; KEGG: mal:MAGa3800 0.0069 thrS; threonyl tRNA synthetase; K01868 threonyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 9.55. (172 aa)    
Predicted Functional Partners:
EKY28315.1
Nitrate reductase, electron transfer subunit; KEGG: pab:PAB1390 3.1e-24 formate dehydrogenase iron-sulfur subunit related protein; K00124 formate dehydrogenase, beta subunit; Psort location: Cytoplasmic, score: 9.97.
   
    0.923
EKY26338.1
Nitrate reductase, electron transfer subunit.
   
    0.923
EKY29465.1
Pyruvate synthase; KEGG: cbt:CLH_0756 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: Cytoplasmic, score: 7.50.
  
   0.818
EKY25379.1
Pyruvate synthase; KEGG: cdc:CD196_2523 0. nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
   0.818
EKY25396.1
Pyruvate synthase; KEGG: cbt:CLH_2077 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
  
   0.818
EKY28114.1
N-6 DNA Methylase; KEGG: gyc:GYMC61_0285 2.1e-105 N-6 DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.786
EKY26264.1
Hypothetical protein.
       0.776
EKY24425.1
Spore germination protein; KEGG: zin:ZICARI_096 0.0054 nuoN; putative NADH:ubiquinone oxidoreductase I, membrane subunit N; K00343 NADH dehydrogenase I subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.693
EKY29370.1
Hypothetical protein; KEGG: cbk:CLL_A0790 9.0e-128 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737.
  
   0.692
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.642
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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