Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKY26281.1 | EKY26282.1 | HMPREF0216_02063 | HMPREF0216_02064 | KEGG: cbt:CLH_2330 3.4e-57 peptidase, M50 family; Psort location: CytoplasmicMembrane, score: 10.00. | Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bwe:BcerKBAB4_2153 5.0e-12 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51. | 0.481 |
| EKY26282.1 | EKY26281.1 | HMPREF0216_02064 | HMPREF0216_02063 | Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bwe:BcerKBAB4_2153 5.0e-12 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51. | KEGG: cbt:CLH_2330 3.4e-57 peptidase, M50 family; Psort location: CytoplasmicMembrane, score: 10.00. | 0.481 |
| EKY26282.1 | EKY27732.1 | HMPREF0216_02064 | HMPREF0216_01206 | Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bwe:BcerKBAB4_2153 5.0e-12 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51. | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.448 |
| EKY26282.1 | codY | HMPREF0216_02064 | HMPREF0216_01723 | Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bwe:BcerKBAB4_2153 5.0e-12 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51. | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.431 |
| EKY27732.1 | EKY26282.1 | HMPREF0216_01206 | HMPREF0216_02064 | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bwe:BcerKBAB4_2153 5.0e-12 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51. | 0.448 |
| codY | EKY26282.1 | HMPREF0216_01723 | HMPREF0216_02064 | GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | Cell envelope-like function transcriptional attenuator common domain protein; KEGG: bwe:BcerKBAB4_2153 5.0e-12 1A family penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.51. | 0.431 |