Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY26284.1Hypothetical protein; KEGG: mei:Msip34_1448 4.4e-07 DNA polymerase III, epsilon subunit K02342. (217 aa)    
Predicted Functional Partners:
EKY27729.1
DNA polymerase III, alpha subunit; KEGG: cbe:Cbei_4853 0. dnaE; DNA polymerase III DnaE K02337; Psort location: Cytoplasmic, score: 9.97.
   
 0.968
EKY27305.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
 0.963
EKY22755.1
KEGG: cbe:Cbei_0820 4.8e-113 holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.945
EKY21952.1
KEGG: cbk:CLL_A0200 4.9e-88 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
  
 0.927
EKY29318.1
Hypothetical protein; KEGG: cbk:CLL_A3447 2.7e-39 dnaX; DNA polymerase III subunits gamma and tau K02343; Psort location: Cytoplasmic, score: 7.50.
   
 0.899
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.899
EKY25979.1
Tetratricopeptide repeat protein; KEGG: dre:324243 7.4e-09 stub1, wu:fc22f04, zgc:56076; STIP1 homology and U-Box containing protein 1; K09561 STIP1 homology and U-box containing protein 1.
 
     0.780
EKY22136.1
Hypothetical protein; KEGG: gfo:GFO_1790 1.8e-12 glycosyl transferase, group 1 K01043; Psort location: CytoplasmicMembrane, score: 9.55.
  
 
   0.773
EKY26094.1
Hypothetical protein; KEGG: gfo:GFO_2687 3.4e-05 L-sorbosone dehydrogenase K00100.
  
     0.764
EKY25128.1
Hypothetical protein; KEGG: bao:BAMF_0407 5.5e-09 rapH1; response regulator aspartate phosphatase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.759
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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