STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26286.1Cupin domain protein; KEGG: apb:SAR116_1185 1.2e-13 probable transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. (179 aa)    
Predicted Functional Partners:
EKY29474.1
Glycosyltransferase, group 2 family protein; KEGG: chu:CHU_1044 4.9e-32 b-glycosyltransferase.
  
 0.960
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.922
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.849
EKY26288.1
Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ddd:Dda3937_03475 7.4e-46 potH; putrescine ABC transporter membrane protein K11075; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.848
EKY26290.1
Putrescine ABC transporter, periplasmic spermidine; KEGG: apb:SAR116_2031 1.8e-35 extracellular solute-binding protein, family 1 K11073.
 
   
 0.847
EKY26289.1
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: aoe:Clos_2538 3.5e-87 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.840
EKY27130.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.1e-24 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
    
 0.809
EKY27387.1
Hypothetical protein.
  
 
 0.804
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.792
EKY24470.1
Cupin domain protein; KEGG: pfr:PFREUD_19900 8.1e-24 pcaC2; 4-carboxymuconolactone decarboxylase.
  
 0.618
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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