STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26288.1Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ddd:Dda3937_03475 7.4e-46 potH; putrescine ABC transporter membrane protein K11075; Psort location: CytoplasmicMembrane, score: 10.00. (281 aa)    
Predicted Functional Partners:
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.999
EKY26289.1
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: aoe:Clos_2538 3.5e-87 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.999
EKY26290.1
Putrescine ABC transporter, periplasmic spermidine; KEGG: apb:SAR116_2031 1.8e-35 extracellular solute-binding protein, family 1 K11073.
 
 
 0.997
EKY23225.1
Putrescine ABC transporter, periplasmic spermidine; KEGG: apb:SAR116_2031 4.1e-29 extracellular solute-binding protein, family 1 K11073.
 
 
 0.987
EKY26286.1
Cupin domain protein; KEGG: apb:SAR116_1185 1.2e-13 probable transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
    0.848
EKY22096.1
ABC transporter, ATP-binding protein; KEGG: tga:TGAM_1852 6.9e-82 malK-3; ABC-type transport system, ATPase component, putative maltose/maltodextrin transporter (MalK) K02023; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.617
EKY26301.1
KEGG: bmq:BMQ_0560 2.6e-114 msmX; maltodextrin import ABC transporter, ATP-binding protein MsmX K10112; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.585
EKY26207.1
Fe(3+)-transporting ATPase family protein.
  
  0.562
EKY26137.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.497
EKY26206.1
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 
0.443
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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