Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY26297.1Ion channel; KEGG: isc:IscW_ISCW022993 7.5e-10 voltage-gated channel, putative; Psort location: CytoplasmicMembrane, score: 10.00. (254 aa)    
Predicted Functional Partners:
EKY23999.1
Potassium uptake protein, TrkH family.
 
 
 0.847
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.775
EKY27619.1
Potassium uptake protein, TrkH family; KEGG: apb:SAR116_1886 2.0e-75 cation transporter K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.654
EKY26632.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.590
EKY23236.1
KEGG: cpr:CPR_1421 1.6e-178 hemD; uroporphyrinogen-III methyltransferase/synthase K13542; Psort location: Cytoplasmic, score: 7.50.
  
    0.472
EKY26298.1
4-alpha-glucanotransferase; KEGG: cpr:CPR_2333 4.5e-197 malQ; 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
       0.458
EKY26296.1
Putative glycerate dehydrogenase; KEGG: cbk:CLL_A0984 3.9e-111 2-hydroxyacid dehydrogenase; Psort location: Cytoplasmic, score: 9.67; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.422
EKY26299.1
Transcriptional regulator, LacI family; KEGG: cbe:Cbei_0863 3.8e-113 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.67.
       0.406
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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