Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26300.1Transcriptional regulator, Fis family; KEGG: zin:ZICARI_050 0.0014 rpoB; putative DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta; Psort location: Cytoplasmic, score: 7.50. (321 aa)    
Predicted Functional Partners:
EKY26301.1
KEGG: bmq:BMQ_0560 2.6e-114 msmX; maltodextrin import ABC transporter, ATP-binding protein MsmX K10112; Psort location: CytoplasmicMembrane, score: 9.96.
       0.753
EKY25409.1
Response regulator receiver domain protein; KEGG: npu:Npun_F1776 3.4e-16 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
  
  0.563
EKY27532.1
PTS system fructose-specific EIIABC component; KEGG: cbe:Cbei_1844 2.2e-234 PTS system, fructose subfamily, IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
      
 0.453
EKY25408.1
Transcriptional regulator, AraC family; KEGG: bay:RBAM_037970 5.1e-06 adaA; AdaA K13530.
  
  
  0.444
EKY22286.1
Exonuclease; KEGG: bce:BC3538 3.5e-09 exonuclease; Psort location: Cytoplasmic, score: 7.50.
  
     0.420
EKY26299.1
Transcriptional regulator, LacI family; KEGG: cbe:Cbei_0863 3.8e-113 alanine racemase K02529; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.415
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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