Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26115.1Hypothetical protein; KEGG: ckl:CKL_0389 1.1e-37 two-component sensor kinase; Psort location: CytoplasmicMembrane, score: 10.00. (428 aa)    
Predicted Functional Partners:
EKY22606.1
Putative transcriptional regulatory protein DcuR; KEGG: btk:BT9727_0488 2.3e-42 response regulator K11615; Psort location: Cytoplasmic, score: 9.67.
 
 0.890
EKY26114.1
KEGG: cno:NT01CX_2060 2.1e-09 putative AgrB-like protein, putative K07813; Psort location: CytoplasmicMembrane, score: 9.99.
    
  0.768
EKY28336.1
KEGG: cno:NT01CX_2060 1.4e-10 putative AgrB-like protein, putative K07813; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.647
EKY23313.1
Accessory protein regulator protein B; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.594
EKY27374.1
Diguanylate cyclase domain protein.
   
 
 0.586
EKY28335.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
     
  0.578
EKY28055.1
LytTr DNA-binding domain protein.
 
 
 0.529
EKY26113.1
Hypothetical protein.
       0.464
EKY26111.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C5174 1.2e-10 arcA; two-component response regulator K07773; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.462
EKY28988.1
LytTr DNA-binding domain protein.
 
 
 0.456
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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