STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26117.1ACT domain protein; KEGG: fpl:Ferp_0598 2.8e-09 phosphoserine phosphatase SerB K01079; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0237 family. (89 aa)    
Predicted Functional Partners:
EKY26118.1
Hypothetical protein; KEGG: bpf:BpOF4_10935 0.0042 dihydroxyacid dehydratase phosphogluconate dehydratase; K01687 dihydroxy-acid dehydratase; Psort location: Cytoplasmic, score: 7.50.
 
     0.947
EKY26116.1
Hypothetical protein.
       0.507
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.491
EKY28518.1
KEGG: cdf:CD1580 1.1e-106 hom2; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.486
EKY28521.1
KEGG: aco:Amico_0519 1.2e-77 homoserine dehydrogenase K00003.
 
  
  0.483
EKY22493.1
KEGG: cbt:CLH_0975 5.9e-163 hom; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
 
  
  0.462
EKY28191.1
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
     
 0.430
EKY28192.1
Hypothetical protein.
     
 0.430
EKY28193.1
Putative L-serine dehydratase, iron-sulfur-dependent, beta subunit.
     
 0.430
EKY29029.1
Bacterial sugar transferase; KEGG: nmc:NMC0399 6.9e-66 PglB2 K01955; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.416
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.