Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26123.1KEGG: bce:BC0268 0.0077 hypothetical protein K03095; Psort location: Cytoplasmic, score: 7.50. (169 aa)    
Predicted Functional Partners:
EKY26122.1
KEGG: bmd:BMD_2432 2.8e-37 NUDIX family hydrolase.
       0.542
EKY26124.1
Hypothetical protein; KEGG: bal:BACI_c32790 0.00012 polyribonucleotide nucleotidyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.506
EKY26125.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.484
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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