STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26151.1KEGG: cbe:Cbei_0941 5.9e-92 serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.68; Belongs to the peptidase S11 family. (426 aa)    
Predicted Functional Partners:
EKY27028.1
Putative serine-type D-Ala-D-Ala carboxypeptidase; KEGG: cbt:CLH_2096 5.0e-150 penicillin-binding protein DacF K07258; Psort location: CytoplasmicMembrane, score: 9.81; Belongs to the peptidase S11 family.
 
  
 
0.831
EKY26957.1
KEGG: cbe:Cbei_1578 2.3e-239 stage V sporulation protein D K08384; Psort location: CytoplasmicMembrane, score: 9.51.
 
 
 0.829
EKY25108.1
Penicillin-binding protein dimerization domain protein.
 
 
 0.819
EKY29274.1
Hypothetical protein; KEGG: btl:BALH_3273 5.3e-20 N-acetylmuramoyl-L-alanine amidase; K01447 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.806
EKY23065.1
Hypothetical protein; KEGG: csh:Closa_3064 2.6e-11 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.87.
   
 
 0.784
EKY25109.1
PASTA domain protein.
  
 
 0.783
EKY26152.1
CobB/CobQ-like protein; KEGG: lsl:LSL_0587 3.4e-64 cobyric acid synthase K07009; Psort location: Cytoplasmic, score: 7.50.
 
     0.781
EKY26174.1
Transglycosylase.
     
 0.780
EKY26153.1
Mur ligase middle domain protein; KEGG: lga:LGAS_1250 4.6e-101 UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
  
  
 0.740
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
   
    0.682
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.