Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26158.1LrgA family protein; KEGG: btk:BT9727_5121 2.0e-13 murein hydrolase regulator LrgA K05338; Psort location: CytoplasmicMembrane, score: 10.00. (137 aa)    
Predicted Functional Partners:
EKY26157.1
TIGR00659 family protein; KEGG: bao:BAMF_3670 5.1e-38 lrgB3; anti-holin factor controlling activity of murein hydrolases; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.996
EKY26159.1
NMT1/THI5-like protein.
       0.592
EKY26160.1
ABC transporter, ATP-binding protein.
       0.480
EKY26161.1
ABC transporter, permease protein.
       0.480
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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