Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25969.1Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family. (196 aa)    
Predicted Functional Partners:
EKY29631.1
Cysteine desulfurase family protein; KEGG: clj:CLJU_c27730 1.2e-118 selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.946
EKY23308.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC01178 1.1e-209 NADH oxidase K00356; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.902
EKY25971.1
Selenium-dependent molybdenum hydroxylase system protein, YqeB family; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.900
EKY29385.1
Putative cysteine desulfurase; KEGG: cbe:Cbei_1312 1.2e-125 aminotransferase, class V; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
   
 0.872
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 0.872
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.870
EKY26110.1
KEGG: cbk:CLL_A2853 3.0e-271 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.795
EKY25964.1
Putative selenium-dependent hydroxylase accessory protein YqeC.
 
   
 0.771
EKY25970.1
Putative xanthine dehydrogenase accessory factor; KEGG: fjo:Fjoh_4205 2.5e-22 alanine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.750
EKY25968.1
Hypothetical protein; KEGG: sis:LS215_0253 4.8e-19 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K07141.
     
 0.699
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.