Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY25982.1KEGG: cbb:CLD_1355 1.0e-110 M16 family peptidase; Psort location: Cytoplasmic, score: 7.50. (412 aa)    
Predicted Functional Partners:
EKY26446.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 9.5e-101 oxidoreductase K00100; Psort location: Cytoplasmic, score: 7.50.
   
 0.892
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
    0.892
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 0.818
EKY25980.1
Transglutaminase-like protein; KEGG: lsg:lse_1465 0.0021 comC; leader peptidase (prepilin peptidase) / N-methyltransferase K02236; Psort location: CytoplasmicMembrane, score: 10.00.
       0.794
EKY27662.1
KEGG: cbk:CLL_A0495 2.2e-23 atpH; F0F1 ATP synthase subunit delta K02113; Psort location: Cytoplasmic, score: 7.50.
   
 0.749
EKY27663.1
ATP synthase subunit delta, sodium ion specific domain protein; KEGG: cpr:CPR_2165 1.6e-20 atpH; F0F1 ATP synthase subunit delta K02113; Psort location: Cytoplasmic, score: 7.50.
   
 0.749
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
 0.691
EKY26258.1
Deoxynucleoside kinase; KEGG: cbt:CLH_1831 2.0e-84 deoxyguanosIne kinase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.680
EKY29391.1
KEGG: tvo:TVN1114 9.0e-09 NADH dehydrogenase subunit C K00332.
   
 
 0.679
EKY27034.1
Hypothetical protein; KEGG: amu:Amuc_2158 0.0019 NADH dehydrogenase (ubiquinone) 30 kDa subunit; K00332 NADH dehydrogenase I subunit C.
   
 
 0.679
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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