Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKY22524.1 | EKY25987.1 | HMPREF0216_03204 | HMPREF0216_02302 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | 0.449 |
EKY25986.1 | EKY25987.1 | HMPREF0216_02301 | HMPREF0216_02302 | Putative 3-oxoacyl-[acyl-carrier-protein] reductase; KEGG: cbk:CLL_A1087 1.3e-80 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059; Psort location: Cytoplasmic, score: 9.97. | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | 0.622 |
EKY25987.1 | EKY22524.1 | HMPREF0216_02302 | HMPREF0216_03204 | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.449 |
EKY25987.1 | EKY25986.1 | HMPREF0216_02302 | HMPREF0216_02301 | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | Putative 3-oxoacyl-[acyl-carrier-protein] reductase; KEGG: cbk:CLL_A1087 1.3e-80 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059; Psort location: Cytoplasmic, score: 9.97. | 0.622 |
EKY25987.1 | EKY25988.1 | HMPREF0216_02302 | HMPREF0216_02303 | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | 0.559 |
EKY25987.1 | EKY29055.1 | HMPREF0216_02302 | HMPREF0216_00414 | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein; KEGG: fma:FMG_0801 1.0e-05 putative anti resistance factor; K11693 peptidoglycan pentaglycine glycine transferase (the first glycine). | 0.484 |
EKY25988.1 | EKY25987.1 | HMPREF0216_02303 | HMPREF0216_02302 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | 0.559 |
EKY29055.1 | EKY25987.1 | HMPREF0216_00414 | HMPREF0216_02302 | Hypothetical protein; KEGG: fma:FMG_0801 1.0e-05 putative anti resistance factor; K11693 peptidoglycan pentaglycine glycine transferase (the first glycine). | Ser/Thr phosphatase family protein; KEGG: cco:CCC13826_1578 0.0037 pyridine nucleotide-disulfide oxidoreductase YkgC; K03269 UDP-2,3-diacylglucosamine hydrolase; Psort location: Cytoplasmic, score: 7.50. | 0.484 |