STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25797.1Dihydropyrimidinase. (463 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.986
EKY28347.1
4Fe-4S binding domain protein; KEGG: tme:Tmel_0121 3.6e-76 dihydroorotate dehydrogenase family protein; K00226 dihydroorotate oxidase; Psort location: Cytoplasmic, score: 9.97.
 
 0.980
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.919
EKY26972.1
Hypothetical protein; KEGG: cbt:CLH_2196 2.7e-16 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825.
  
 
 0.878
EKY28352.1
Putative selenium metabolism hydrolase; KEGG: eci:UTI89_C3257 7.8e-145 ygeY; peptidase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.835
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 
 0.832
EKY28326.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cbe:Cbei_1830 1.4e-156 putative oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.788
EKY22103.1
Glutamate synthase; KEGG: cbt:CLH_2956 3.2e-210 gltA; putative oxidoreductase K00266; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.788
EKY28346.1
Selenium-dependent molybdenum hydroxylase 1; KEGG: cbo:CBO2881 3.2e-299 xdhAC; xanthine dehydrogenase family protein, molybdopterin-binding subunit; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.776
EKY28348.1
Putative chlorohydrolase/aminohydrolase; KEGG: ssm:Spirs_1387 1.0e-64 selenium metabolism protein SsnA; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.774
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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