Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25823.1Oligoendopeptidase, pepF/M3 family; KEGG: tte:TTE2488 7.4e-172 oligoendopeptidase F; K01417; Psort location: Cytoplasmic, score: 9.97. (592 aa)    
Predicted Functional Partners:
EKY25824.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: hel:HELO_3269 1.0e-110 aldo/keto reductase; Psort location: Cytoplasmic, score: 7.50.
       0.728
EKY25822.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.658
EKY25825.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.423
EKY28192.1
Hypothetical protein.
 
     0.414
EKY25821.1
PTS system fructose IIA component; KEGG: sth:STH1251 3.5e-16 agaF; PTS system N-acetylgalactosamine-specific IIA component; K02744 PTS system, N-acetylgalactosamine-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
       0.413
EKY26144.1
Putative aminopeptidase II; KEGG: cpf:CPF_2253 3.0e-129 aminopeptidase K01269.
 
   
 0.410
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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