mrnC protein (Clostridium celatum) - STRING interaction network

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mrnC

RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (136 aa)

Predicted Functional Partners:

EKY25614.1

0.977

EKY25613.1

0.963

cysS

0.957

rplC

0.809

EKY25615.1

0.776

EKY26969.1

0.753

EKY26974.1

0.742

rpmA

0.706

rplU

0.704

rplJ

0.678

Your Current Organism:

Clostridium celatum

NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKY25613.1	EKY25614.1	HMPREF0216_02433	HMPREF0216_02434	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	0.968
EKY25613.1	EKY25615.1	HMPREF0216_02433	HMPREF0216_02435	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	KEGG: cbe:Cbei_0135 6.2e-81 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 7.50.	0.765
EKY25613.1	cysS	HMPREF0216_02433	HMPREF0216_02431	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	cysteine--tRNA ligase; KEGG: cpe:CPE2427 1.2e-212 cysS; cysteinyl-tRNA synthetase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.866
EKY25613.1	mrnC	HMPREF0216_02433	HMPREF0216_02432	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.963
EKY25613.1	rplC	HMPREF0216_02433	HMPREF0216_01151	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.807
EKY25613.1	rplU	HMPREF0216_02433	HMPREF0216_03306	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.812
EKY25613.1	rpmA	HMPREF0216_02433	HMPREF0216_03304	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosomal protein L27; KEGG: apb:SAR116_1855 2.6e-18 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL27 family.	0.591
EKY25614.1	EKY25613.1	HMPREF0216_02434	HMPREF0216_02433	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.968
EKY25614.1	EKY25615.1	HMPREF0216_02434	HMPREF0216_02435	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	KEGG: cbe:Cbei_0135 6.2e-81 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 7.50.	0.838
EKY25614.1	EKY26969.1	HMPREF0216_02434	HMPREF0216_01572	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	S4 domain protein.	0.628
EKY25614.1	cysS	HMPREF0216_02434	HMPREF0216_02431	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	cysteine--tRNA ligase; KEGG: cpe:CPE2427 1.2e-212 cysS; cysteinyl-tRNA synthetase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.884
EKY25614.1	mrnC	HMPREF0216_02434	HMPREF0216_02432	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.977
EKY25615.1	EKY25613.1	HMPREF0216_02435	HMPREF0216_02433	KEGG: cbe:Cbei_0135 6.2e-81 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 7.50.	KEGG: cbt:CLH_0218 1.0e-94 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 7.50; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.765
EKY25615.1	EKY25614.1	HMPREF0216_02435	HMPREF0216_02434	KEGG: cbe:Cbei_0135 6.2e-81 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 7.50.	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	0.838
EKY25615.1	cysS	HMPREF0216_02435	HMPREF0216_02431	KEGG: cbe:Cbei_0135 6.2e-81 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 7.50.	cysteine--tRNA ligase; KEGG: cpe:CPE2427 1.2e-212 cysS; cysteinyl-tRNA synthetase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.542
EKY25615.1	mrnC	HMPREF0216_02435	HMPREF0216_02432	KEGG: cbe:Cbei_0135 6.2e-81 RNA polymerase factor sigma-70 K03091; Psort location: Cytoplasmic, score: 7.50.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.776
EKY26969.1	EKY25614.1	HMPREF0216_01572	HMPREF0216_02434	S4 domain protein.	Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.	0.628
EKY26969.1	mrnC	HMPREF0216_01572	HMPREF0216_02432	S4 domain protein.	RNase3 domain protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.753
EKY26969.1	rplC	HMPREF0216_01572	HMPREF0216_01151	S4 domain protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.573
EKY26969.1	rplU	HMPREF0216_01572	HMPREF0216_03306	S4 domain protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.694

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