close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25464.1Amidohydrolase; KEGG: cbt:CLH_1738 3.1e-189 thermostable carboxypeptidase 2; Psort location: Cytoplasmic, score: 7.50. (394 aa)    
Predicted Functional Partners:
EKY28426.1
Class II glutamine amidotransferase.
    
  0.826
EKY25463.1
HTH domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.631
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.601
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
 
  
 0.465
EKY25465.1
Mg2+ transporter-C family protein; KEGG: hip:CGSHiEE_08975 4.0e-15 coaD; phosphopantetheine adenylyltransferase K07507; Psort location: CytoplasmicMembrane, score: 9.55.
       0.429
EKY25466.1
Hypothetical protein.
       0.429
EKY25462.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dfe:Dfer_0792 6.1e-106 histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
       0.410
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.