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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25465.1Mg2+ transporter-C family protein; KEGG: hip:CGSHiEE_08975 4.0e-15 coaD; phosphopantetheine adenylyltransferase K07507; Psort location: CytoplasmicMembrane, score: 9.55. (194 aa)    
Predicted Functional Partners:
EKY25466.1
Hypothetical protein.
       0.773
EKY27510.1
VTC domain protein.
  
    0.461
EKY23294.1
VTC domain protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.461
EKY25464.1
Amidohydrolase; KEGG: cbt:CLH_1738 3.1e-189 thermostable carboxypeptidase 2; Psort location: Cytoplasmic, score: 7.50.
       0.429
EKY25467.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.425
EKY25468.1
Oligopeptide transporter, OPT family; KEGG: mfs:MFS40622_1836 0.0071 V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
       0.425
EKY23320.1
Hypothetical protein.
  
  
 0.415
EKY26462.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.413
EKY23219.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
   
  
 0.413
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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