Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY25476.1Transcriptional regulator, LacI family; KEGG: amt:Amet_0455 5.5e-41 alanine racemase K01775; Psort location: Cytoplasmic, score: 9.67. (326 aa)    
Predicted Functional Partners:
EKY28426.1
Class II glutamine amidotransferase.
    
 
 0.834
EKY29652.1
KEGG: bmq:BMQ_3353 6.3e-207 PTS system, beta-glucoside-specific IIABC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.832
EKY28978.1
PTS system, beta-glucoside-specific, IIABC component.
  
 
 0.832
EKY25475.1
Phosphotransferase system, EIIB; KEGG: lba:Lebu_1906 4.1e-19 PTS system, sucrose-specific IIBC subunit; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.728
EKY24021.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.715
EKY27160.1
KEGG: bmd:BMD_1283 2.4e-17 ptsH; phosphocarrier protein HPr; Psort location: Cytoplasmic, score: 10.00.
   
 
 0.708
EKY25474.1
PTS system trehalose-specific EIIBC component family protein; KEGG: str:Sterm_3657 4.0e-118 PTS system, sucrose-specific IIBC subunit; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.656
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.534
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
   0.534
EKY26874.1
KEGG: cbt:CLH_1686 1.3e-206 treP; PTS system, trehalose-specific IIBC component; K02818 PTS system, trehalose-specific IIB component K02819; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.533
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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