STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25480.1LytTr DNA-binding domain protein; Psort location: Cytoplasmic, score: 7.50. (162 aa)    
Predicted Functional Partners:
EKY25479.1
Hypothetical protein; KEGG: gdj:Gdia_3338 0.00076 NADH-ubiquinone oxidoreductase chain 4L; K00340 NADH dehydrogenase I subunit K; Psort location: CytoplasmicMembrane, score: 10.00.
       0.805
EKY25478.1
Hypothetical protein; KEGG: tpp:TPASS_1039 0.0039 apt; adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase.
       0.741
EKY28151.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
  
 
 0.491
EKY25407.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4430 5.6e-222 multi-sensor signal transduction histidine kinase; K07718 two-component system, sensor histidine kinase YesM; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.491
EKY27949.1
Putative glutamate-5-semialdehyde dehydrogenase; KEGG: cbe:Cbei_0025 8.4e-93 proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
   0.465
EKY27950.1
Hypothetical protein; KEGG: bmq:BMQ_5237 1.0e-41 proA; gamma-glutamyl phosphate reductase K00147; Psort location: Cytoplasmic, score: 9.97.
    
   0.465
EKY25477.1
KEGG: rlt:Rleg2_4805 1.8e-15 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.440
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.