STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25482.1Hypothetical protein; KEGG: mrb:Mrub_1821 1.7e-08 beta-lactamase domain-containing protein; K12574 ribonuclease J; Psort location: Cytoplasmic, score: 7.50. (430 aa)    
Predicted Functional Partners:
EKY25481.1
5'-nucleotidase protein; KEGG: taf:THA_1701 5.7e-94 2',3'-cyclic-nucleotide 2'-phosphodiesterase; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Psort location: Cellwall, score: 8.97; Belongs to the 5'-nucleotidase family.
 
     0.726
rny
YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
  
 
 0.650
EKY22099.1
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 2.8e-05 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027.
 
     0.586
EKY29491.1
KEGG: ldb:Ldb0450 1.9e-38 tarB; putative CDP-glycerol:glycerophosphate glycerophosphotransferase K01005; Psort location: CytoplasmicMembrane, score: 9.51.
  
     0.525
EKY27002.1
Putative geranyltranstransferase; KEGG: cbe:Cbei_1705 8.8e-98 polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II; Psort location: Cytoplasmic, score: 9.97.
  
    0.466
EKY23259.1
Polyprenyl synthetase; KEGG: lmc:Lm4b_02608 1.2e-84 heptaprenyl diphosphate synthase component II; K00805 heptaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
  
    0.466
EKY22336.1
F5/8 type C domain protein; KEGG: rsa:RSal33209_3408 4.5e-117 alpha-glucosidase; Psort location: Extracellular, score: 9.73.
  
     0.466
EKY28799.1
F5/8 type C domain protein; KEGG: rsa:RSal33209_3408 2.7e-112 alpha-glucosidase; Psort location: Extracellular, score: 9.73.
  
     0.460
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
 
 0.452
EKY25483.1
KEGG: cbe:Cbei_4479 5.0e-166 glycerate kinase K00865; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycerate kinase type-1 family.
       0.434
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.