STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25484.1KEGG: abu:Abu_0457 1.1e-12 hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (108 aa)    
Predicted Functional Partners:
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.999
EKY26443.1
KEGG: cbt:CLH_0670 9.2e-261 NADH oxidase; Psort location: Cytoplasmic, score: 7.50.
  
 0.972
EKY27840.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
 
 
 0.870
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.709
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
   0.683
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
    
   0.663
EKY27622.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC02435 2.8e-53 sarcosine oxidase alpha subunit K00302; Psort location: CytoplasmicMembrane, score: 8.78.
   
 0.661
EKY26361.1
Hypothetical protein; KEGG: cac:CA_C1548 8.2e-15 trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH).
   
 0.661
EKY26362.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cbk:CLL_A3210 4.0e-86 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.97.
   
 0.661
EKY26260.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cbi:CLJ_B3741 1.2e-114 gidA_2; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.67.
   
 0.661
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.