Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY25388.1MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.0e-17 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00. (462 aa)    
Predicted Functional Partners:
gshAB
Glutamate--cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.
       0.788
EKY25389.1
Putative arsenical resistance operon repressor; KEGG: rru:Rru_A1450 1.3e-08 ArsR family transcriptional regulator K03741; Psort location: Cytoplasmic, score: 7.50.
       0.624
EKY26454.1
MATE domain protein; KEGG: rlt:Rleg2_4805 2.0e-05 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.607
EKY25386.1
Hypothetical protein; KEGG: ncr:NCU09123 0.0022 calcium/calmodulin-dependent protein kinase; K00908 Ca2+/calmodulin-dependent protein kinase; Psort location: Cytoplasmic, score: 7.50.
       0.464
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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