Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25418.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (188 aa)    
Predicted Functional Partners:
EKY25419.1
KEGG: cbt:CLH_2281 1.1e-131 uvsE; putative UV damage endonuclease; K13281 UV DNA damage endonuclease.
 
     0.512
EKY25402.1
Heavy metal-associated domain protein; KEGG: cbt:CLH_3060 3.5e-16 copper-transporting P-type ATPase; Psort location: Cytoplasmic, score: 7.50.
 
     0.426
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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