Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY25419.1KEGG: cbt:CLH_2281 1.1e-131 uvsE; putative UV damage endonuclease; K13281 UV DNA damage endonuclease. (320 aa)    
Predicted Functional Partners:
EKY25418.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.512
EKY25414.1
KEGG: bmq:BMQ_3498 2.0e-82 oxidoreductase, short chain dehydrogenase/reductase family protein; Psort location: Cytoplasmic, score: 9.67.
 
    0.491
EKY22528.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.456
EKY26878.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.442
EKY29280.1
Insertion element protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.420
EKY25537.1
Hypothetical protein.
  
     0.419
EKY22529.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.415
EKY25417.1
KEGG: ate:Athe_0809 7.1e-64 elongation factor G; K02355 elongation factor EF-G; Psort location: Cytoplasmic, score: 9.97.
 
     0.407
EKY29373.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.401
EKY26569.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.401
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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