Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25425.1Transcriptional regulator, GntR family; KEGG: bcz:pE33L466_0090 5.3e-09 aminotransferase, MocR-like K00375; Psort location: Cytoplasmic, score: 7.50. (134 aa)    
Predicted Functional Partners:
EKY25424.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.888
EKY25423.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.773
EKY25422.1
Hypothetical protein; KEGG: fnu:FN0898 5.3e-05 spore photoproduct K03716.
       0.718
EKY28890.1
KEGG: bal:BACI_c40440 8.0e-17 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
     0.682
EKY28207.1
Transcriptional regulator, GntR family.
  
     0.535
EKY25421.1
Putative transcriptional regulatory protein WalR; KEGG: npu:Npun_F5788 1.2e-43 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  
    0.517
EKY25420.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC00412 4.7e-67 phoR; alkaline phosphatase synthesis sensor protein PhoR K00936; Psort location: Cytoplasmic, score: 9.20.
       0.508
EKY25426.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_0813 2.2e-37 oxidoreductase (putative) K03810; Psort location: Cytoplasmic, score: 7.50.
       0.494
EKY28891.1
KEGG: hpa:HPAG1_1162 8.5e-29 ABC transporter, ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 9.51.
 
    0.463
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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