Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25428.1Citrate transporter; KEGG: cpo:COPRO5265_0907 0.0019 oxaloacetate decarboxylase beta chain K01572; Psort location: CytoplasmicMembrane, score: 10.00. (445 aa)    
Predicted Functional Partners:
EKY27532.1
PTS system fructose-specific EIIABC component; KEGG: cbe:Cbei_1844 2.2e-234 PTS system, fructose subfamily, IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.559
EKY25483.1
KEGG: cbe:Cbei_4479 5.0e-166 glycerate kinase K00865; Psort location: Cytoplasmic, score: 7.50; Belongs to the glycerate kinase type-1 family.
  
  
 0.500
EKY25427.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.497
EKY29253.1
Hypothetical protein; KEGG: cob:COB47_0778 2.2e-37 rhamnulokinase K00848; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.409
EKY29254.1
Hypothetical protein; KEGG: cob:COB47_0778 6.1e-74 rhamnulokinase K00848.
  
  
 0.409
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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