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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25199.1CotH protein. (212 aa)    
Predicted Functional Partners:
EKY27508.1
CotH protein; Psort location: CytoplasmicMembrane, score: 9.87.
 
     0.976
EKY27509.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.799
EKY27510.1
VTC domain protein.
 
     0.798
EKY23293.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.653
EKY23294.1
VTC domain protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.543
EKY25198.1
Hypothetical protein.
       0.463
EKY26461.1
Transporter, major facilitator family protein; KEGG: cvi:CV_2798 9.4e-16 macrolide efflux protein; K00836 diaminobutyrate-2-oxoglutarate transaminase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.427
EKY22087.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
  0.416
EKY22089.1
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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