Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25109.1PASTA domain protein. (290 aa)    
Predicted Functional Partners:
EKY25108.1
Penicillin-binding protein dimerization domain protein.
  
 0.994
EKY25111.1
Stage V sporulation protein E domain protein; Belongs to the SEDS family.
 
 0.947
EKY25110.1
Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
 
 0.945
EKY23065.1
Hypothetical protein; KEGG: csh:Closa_3064 2.6e-11 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.87.
  
 0.899
EKY26174.1
Transglycosylase.
 
 
 0.880
EKY29047.1
Type VII secretion protein EssC; KEGG: eci:UTI89_C0905 3.2e-12 ftsK; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 8.78.
   
 0.865
EKY26961.1
Stage V sporulation protein E; KEGG: hiq:CGSHiGG_09345 5.9e-53 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.861
EKY27640.1
Cyanophycin synthase; KEGG: cbt:CLH_0462 2.0e-297 cphA; cyanophycin synthetase K03802; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.814
EKY25745.1
Hypothetical protein.
     
 0.783
EKY25751.1
Beta-lactamase; KEGG: rca:Rcas_2208 5.9e-37 serine-type D-Ala-D-Ala carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.68.
     
 0.783
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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