Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY25117.1Hypothetical protein. (431 aa)    
Predicted Functional Partners:
EKY25116.1
Putative RNA polymerase sigma factor SigV; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
   0.850
EKY25748.1
Ser/Thr phosphatase family protein.
 
  
 0.624
EKY25114.1
Hypothetical protein.
       0.432
EKY25115.1
Hypothetical protein.
       0.432
EKY22885.1
KEGG: btk:BT9727_3349 5.3e-20 RNA polymerase ECF-type sigma factor K03088; Psort location: Cytoplasmic, score: 9.67; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.428
EKY26192.1
LPXTG-motif protein cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
    
 0.424
EKY25087.1
Hypothetical protein.
  
 0.424
EKY24467.1
KEGG: cla:Cla_0918 0.0016 ABC transporter, ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.420
EKY23531.1
Hypothetical protein; KEGG: bde:BDP_1701 2.0e-13 bbgIII; beta-galactosidase BbgIII.
     
  0.410
EKY22403.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: lrh:LGG_00434 2.3e-10 nagZ; beta-N-acetylhexosaminidase (GH3); K01207 beta-N-acetylhexosaminidase; Psort location: Cellwall, score: 9.97.
     
  0.410
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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