STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25125.1Ribonuclease HI; KEGG: cpr:CPR_1436 7.1e-64 RNAse H family protein K03469. (208 aa)    
Predicted Functional Partners:
EKY25124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.722
EKY25129.1
Tetratricopeptide repeat protein; KEGG: bsu:BSU25830 7.3e-06 rapE; response regulator aspartate phosphatase K06363; Psort location: Cytoplasmic, score: 7.50.
 
     0.569
EKY25126.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.545
EKY25127.1
KEGG: apb:SAR116_1706 0.00017 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.512
EKY25128.1
Hypothetical protein; KEGG: bao:BAMF_0407 5.5e-09 rapH1; response regulator aspartate phosphatase; Psort location: Cytoplasmic, score: 7.50.
 
     0.478
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.