STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY25127.1KEGG: apb:SAR116_1706 0.00017 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50. (129 aa)    
Predicted Functional Partners:
EKY25128.1
Hypothetical protein; KEGG: bao:BAMF_0407 5.5e-09 rapH1; response regulator aspartate phosphatase; Psort location: Cytoplasmic, score: 7.50.
  
 0.995
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.928
EKY27130.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.1e-24 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
    
 0.860
EKY25129.1
Tetratricopeptide repeat protein; KEGG: bsu:BSU25830 7.3e-06 rapE; response regulator aspartate phosphatase K06363; Psort location: Cytoplasmic, score: 7.50.
 
   
0.860
EKY22134.1
Tetratricopeptide repeat protein; KEGG: hor:Hore_12160 4.2e-06 peptidyl-prolyl cis-trans isomerase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.823
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.794
EKY28937.1
Hypothetical protein.
  
    0.755
EKY28132.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.746
EKY27624.1
Crossover junction endodeoxyribonuclease RusA; KEGG: dfe:Dfer_3850 0.0069 carboxyl-terminal protease K03797; Psort location: Cytoplasmic, score: 7.50.
  
     0.739
EKY27778.1
Hypothetical protein.
  
    0.736
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.