STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureFUrease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (234 aa)    
Predicted Functional Partners:
ureC
Urease, alpha subunit; KEGG: cpy:Cphy_0687 3.5e-213 ureC; urease subunit alpha; K01428 urease subunit alpha; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.998
ureE
Urease accessory protein UreE domain protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.997
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.997
ureA
Urease, gamma subunit; KEGG: ach:Achl_0390 8.6e-36 ureA; urease subunit gamma K01430; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.994
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.992
ureB
Urease, beta subunit; KEGG: aau:AAur_0215 1.5e-31 ureB; urease, beta subunit K01429; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.987
EKY29394.1
Hydrogenase accessory protein HypB; KEGG: pmo:Pmob_0551 3.7e-08 ArgK protein; K07588 LAO/AO transport system kinase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.937
EKY24614.1
AmiS/UreI family transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.602
EKY24613.1
KEGG: apb:SAR116_0035 5.4e-66 ammonium transporter K03320; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.485
EKY24605.1
Carbonate dehydratase; KEGG: tjr:TherJR_0949 5.5e-41 carbonic anhydrase; K01673 carbonic anhydrase; Psort location: Cytoplasmic, score: 9.67.
       0.459
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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