Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY24615.1Hypothetical protein; KEGG: cdf:CD0784 1.7e-13 putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase. (77 aa)    
Predicted Functional Partners:
EKY24616.1
KEGG: cdf:CD0784 3.4e-48 putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50.
 
     0.914
EKY28064.1
N-acetylmuramoyl-L-alanine amidase.
   
 0.619
EKY25988.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.540
EKY25785.1
SH3 domain protein.
  
 
 0.540
EKY24614.1
AmiS/UreI family transporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.526
EKY25650.1
Hypothetical protein.
  
     0.519
EKY28835.1
Hypothetical protein; KEGG: lsp:Bsph_0244 0.00039 periplasmic serine protease DO-like precursor; Psort location: Cytoplasmic, score: 7.50.
  
     0.510
EKY24020.1
Hypothetical protein.
  
     0.487
EKY22167.1
4Fe-4S binding domain protein; KEGG: mba:Mbar_A3287 3.7e-19 nitroreductase; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
 
    0.481
EKY29662.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.480
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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