STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY24636.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
EKY24638.1
Single-strand binding family protein.
 
     0.883
EKY27871.1
DnaD domain protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.758
EKY27869.1
DNA replication protein DnaC; KEGG: apb:SAR116_1558 0.0015 ATPase K02313; Psort location: Cytoplasmic, score: 9.97.
  
     0.697
EKY21952.1
KEGG: cbk:CLL_A0200 4.9e-88 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
  
    0.694
EKY27638.1
LysM domain protein; KEGG: fps:FP0019 0.00013 mltD; membrane-bound lytic murein transglycosylase D precursor K08307; Psort location: Cytoplasmic, score: 7.50.
  
     0.670
EKY24637.1
Sporulation protein PdaB, polysaccharide deacetylase family; KEGG: ctc:CTC02298 2.4e-63 chitooligosaccharide deacetylase K01463; Psort location: Extracellular, score: 9.60.
       0.651
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.633
EKY23997.1
Hypothetical protein.
  
     0.613
EKY23994.1
Hypothetical protein.
  
     0.612
EKY27879.1
Hypothetical protein; KEGG: ddd:Dda3937_02235 5.0e-05 secA, azi, pea, prlD; preprotein translocase subunit, ATPase K03070; Psort location: Cytoplasmic, score: 7.50.
  
     0.590
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.